5:00 p.m. - 7:00 p.m. Meet & Greet Happy Hour in Sococo Lounge
8:00 a.m. - 8:30 a.m. Welcome | Joshua T. Schiffer and Elissa J. Schwartz
8:30 a.m. - 9:10 a.m. Plenary Speaker | Stephen Kissler, Harvard T.H. Chan School of Public Health
SARS-CoV-2 viral dynamics from longitudinal surveillance tests: inference and applications
9:10 a.m. - 9:30 a.m. Budhaditya Chatterjee, Indian Institute of Science Bangalore
Modeling how the interplay between innate immune and CD8 T-cell responses underlies the heterogeneous outcomes of SARS-CoV-2 infection
9:30 a.m. - 9:50 a.m. Aurélien Marc, French National Institute of Health and Medical Research (Inserm)
Quantifying the relationship between SARS-CoV-2 viral load and infectiousness
9:50 a.m. - 10:10 a.m. Ruian Ke, Los Alamos National Laboratory
Modeling of early infection of SARS-COV-2 and the B.1.1.7 variant from densely sampled unvaccinated and vaccinated individuals
10:10 a.m. - 10:30 a.m. Break — Meet in Sococo
10:30 a.m. - 10:50 am Ruy M. Ribeiro, Los Alamos National Laboratory
How do we detect more SARS-CoV-2 infected people? Testing strategies informed by viral dynamics
10:50 a.m. - 11:10 am Melanie Moses, University of New Mexico
Spatially distributed infection increases viral load in a computational model of SARS-CoV-2 lung infection
11:10 a.m. - 11:30 am Naveen Vaidya, San Deigo State University
Modeling Within-Host Dynamics of SARS-CoV-2 Infection in Ferrets
11:30 a.m - 11:50 am Christopher Brooke, University of Illinois at Urbana-Champaign
Daily longitudinal sampling of SARS-CoV-2 infection in naïve and vaccinated humans reveals tissue compartmentalization and benefits of serial testing.
11:50 a.m. - 12:30 p.m. Break — Meet in Sococo
12:30 p.m. - 1:10 p.m. Plenary Speaker | Robert F. Siliciano, Johns Hopkins University School of Medicine
HIV decay dynamics: implications for cure
1:10 p.m. - 1:30 p.m. Lucas Böttcher, Frankfurt School of Finance and Management gGmbH
Clonal population dynamics of HIV-infected cells after administration and cessation of antiretroviral therapy
1:30 p.m. - 1:50 p.m. Andrea Ramirez, University of Florida
A machine learning approach to predicting immune-mediated viral neuroadaptation in the macaque model of HIV infection
1:50 p.m. - 2:10 p.m. Steffen Docken, University of New South Wales
Not all virus is produced equally: Characterization of the variability of Simian Immunodeficiency Virus production
2:30 p.m. - 4:30 p.m. Poster Session 1 — Sococo
5:00 p.m. - 6:00 p.m. Happy hour/ Breakfast (greetings with Asian Pacific & Australian attendees) — Sococo lounge and common areas
8:15 a.m. - 8:30 a.m. Welcome Joshua T. Schiffer and Elissa J. Schwartz
8:30 a.m. -9:10 a.m. Plenary Speaker | Wilfred Ndifon, African Institute for Mathematical Sciences (AIMS)
Organizing principles of T-cell immunity, and implications for virus dynamics
9:10 a.m. - 9:30 a.m. Emily E. Ackerman, University of Pittsburgh
Interferon Production Rate is a Major Contributor to Differential Strain-Specific Immunodynamics
9:30 a.m. - 9:50 a.m. Christian Quirouette, Ryerson University
A mathematical model describing the localization and spread of influenza A virus infection within the human respiratory tract
9:50 a.m. -10:10 a.m. David Swigon, University of Pittsburgh
Mathematical modeling approaches for in-host immune response to IAV infection
10:10 a.m. - 10:30 a. m. Break — Meet in Sococo
10:30 a.m. - 10:50 a.m. Daniel Rüdiger, Max Planck Institute for Dynamics of Complex Technical Systems
Multiscale model of influenza A virus and defective interfering particle co-infection in animal cell culture
10:50 a.m. -11:10 a.m Frederik Graw, Heidelberg University
From local to global control: The interaction of murine cytomegalovirus replication and IFNγ-producing CD4+ T cells in the salivary gland
11:10 a.m. - 11:30 a.m. Soheil Rastgou Talemi, German Cancer Research Center
Host factors are the key regulators of heterogeneity in dengue virus replication onset and capacity following virus entry into the cell
11:30 a.m. - 11:50 a.m. Gang Zhao, Helmholtz Center for Infection Research
Delayed type 1 interferon response and the subsequent out-of-sequence signal for T cell induction in non-surviving Ebola infected patients
11:50 a.m. - 12:10 p.m. Elissa Schwartz, Washington State University
Quantifying in vivo virus dynamics and escape in equine infectious anemia virus (EIAV) infection
12:10 p.m. - 12:40 p.m. Break — Meet in Sococo
12:40 p.m. - 1 p.m. Catherine Byrne, The University of British Columbia
Examining the Dynamics and Spatiotemporal Spread of Primary MCMV Infection
1 p.m .- 1:20 p.m. Sivan Leviyang, Georgetown University
The Patterns and Functionality of Heterogeneity in the Type I Interferon Response
1:20 p.m. - 1:40 p.m. Jannatul Ferdous, University of New Mexico
Distributed Processing in Lymph Nodes Supports a Scalable Immune Response
1:40 p.m. - 2 p.m. Jordan J.A. Weaver, University of Pittsburgh
A Spatial Model of Interferon Signaling and Virus Replication Gives Insights into Plaque Growth Dynamics
2 p.m. - 2:20 p.m. Ke Li, The University of Melbourne
Modeling the effect of MUC1 on influenza virus infection kinetics and macrophage dynamics
2:30 p.m. - 4:30 p.m. Poster Session 2 — Sococo
8:15 a.m. - 8:30 a.m. Welcome Joshua T. Schiffer and Elissa J. Schwartz
8:30 a.m. - 9:10 a.m. Plenary Speaker | Katia Koelle, Emory University
Considering cellular coinfection in within-host viral dynamics and evolution
9:10 a.m. - 9:30 a.m. Mélanie Prague, Université de Bordeaux, Inserm, Inria
Fast Automatic Model Building in Nonlinear Mixed Effects Models with SAMBA
9:30 a.m. - 9:50 a.m. Gary An, University of Vermont
Becoming bat-man: insights into potential viral-species-agnostic interventions to control viral disease severity from comparative computational modeling between bats and humans
9:50 a.m. - 10:10 a.m. Daniel Reeves, Fred Hutchinson Cancer Research Center
Merging viral dynamics and phylodynamics for HIV primary infection
10:10 a.m. - 10:30 a.m. Break — Meet in Sococo
10:30 a.m. - 10:50 a.m. Jérémy Seurat, INSERM IAME UMR 1137 - Université Paris Diderot
Combination of in vivo phage therapy data with in silico model highlights key parameters for treatment efficacy
10:50 a.m. - 11:10 a.m. Richard Bingham, University of York
A stochastic, multiscale model of Hepatitis C infection reveals the potential of a novel therapeutic interfering particle design
11:10 a.m. - 11:30 a.m. Fabian Cardozo-Ojeda, Fred Hutchinson Cancer Research Center
Modeling the pharmacokinetics and pharmacodynamics of eCD4Ig in SHIV-infected rhesus macaques
11:30 a.m. - 11:50 a.m. Ashish Goyal, Pfizer Inc
Modeling HBV DNA and ALT responses observed under an entry inhibitor in HBV monoinfected individuals supports heterogeneity in the infected cell population
11:50 a.m. -12:30 p.m. Break — Meet in Sococo
12:30 p.m. - 12:50 p.m. Bryan T. Mayer, Fred Hutchinson Cancer Research Center
Optimizing clinical dosing of combination broadly neutralizing antibodies for HIV prevention
12:50 p.m. - 1:10 p.m. Jay Srinivas, Loyola University Chicago
Mathematical modeling of early hepatitis D virus kinetics in transgenic-hNTCP mice
1:10 p.m. - 1:30 p.m. Shingo Iwami, Nagoya University
Elimination of intrahepatic cccDNA of patient could be predicted by combination of personal viral markers
1:30 p.m. - 1:50 p.m. Shoya Iwanami, Nagoya University
Detection of significant antiviral drug effects on COVID-19 with reasonable sample sizes in randomized controlled trials
1:50 p.m. - 2:30 p.m. Farewell session — Sococo common areas
2:30 p.m. - 3:30 p.m. Post-workshop Professional Development Session (for trainees)